Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916629.1_cds_XP_016466316.1_59181
CDS Infomation

[gene=LOC107789065] [db_xref=GeneID:107789065] [protein=serine carboxypeptidase-like 13] [protein_id=XP_016466316.1] [location=join(12654..12746,13514..13829,15949..16126,16495..16640,16911..16987,17078..17200,17312..17414,18749..18786,18878..18976,19208..19336,19487..19558,19675..19802,20246..20359,20468..20513,21185..21268)] [gbkey=CDS]
Sequence

ATGGCGAATCAAGTTCGACCCTGCTCGGAGCCTGGCGGCTTTGCAACTGAGCTATCAGCA
CCTGTTGGGCTTGCAGCATTTCGAAAATCATGCTTAAATGGCGAGAATTACGGATCCCTG
TCGGCGGAGTTGGCAGGTCTTTTCTTCGAGGCTGTTAAGAATAGGATCGGTTACGTCCTC
GACAAACTCGGGGCAAGTCTGATGATTTCGATGGCTGGCTTCGATATTGCTTTCGAGTCC
GATATTTATCATATTCCGATTCAGCTGATTATGTTGGACATTAGATCGAACCCGAACTTC
GATCTCGAGATCGGTGTTACCGTGACTTTGATTTCTACCCAGATATGGATGTGCCGACTT
CGGTCTATTGCTTCAGATGCCCGATCGAGCATCGGGCTCGGTTTTACCTACACACACACA
CACACACATATATATATATATANTATTATTTCACTTGTGTCCATCATCAACTTCTTTTTG
CTGTTTTATAGAGTTGTTGTCCTACCACAACATGCTGCTGCTTCTCACTCTACCGTTGAA
TTTCTTCCTGGATTTGAAGGTCCACTTCCTTTCCATCTTGAGACTGGGTATATTGGAGTA
GGTGAATATGAAGAAGTGCAGCTCTTTTATTATTTTCTTAAATCAGAATCAGAACCCACA
AAAGATCCTATTTTGATTTGGCTCTCAGGAGGACCTGGTTGCTCTTCCTTTACTGCACTT
GTTTATCAAATAGGGCCCTTGTATTTTGAGCCAAACGAGTATAATGGGAGCCTTCCAAAG
CTAACATTGAATCCAAACTCATGGACCAAGGTAGCTAACATAATATTCTTGGATCAACCT
GTGAATAGTGGCTTCTCTTATGCAACAACTTCAACAACATTCAAGTCTACTGATCTACAA
GCATGCCACCATATCTACCAGTTTTTGCGAAAGTGGTTGATTAAGCATCAAGAGTTCATT
AGGAATCCAATGTACATTGGTGGAGATTCATATTCTGGCATCACTGTTCCAGTTATCACT
CAACTAATATCAAATGGAATTGAAGCAGGGCACAAGCCATCGATTAATCTTAAGGGATAT
ATACTTGGGAATCCTAGCACGTTTCCTCTTCAATATAACTACTGGGTTCCTTATGCTCAT
GGAATGGGACTTATCTCCGACGAACTTTATCAGTTGATTAGTGGAATCAATAAGCCACAC
ATCCTAGAGCCCTCGTGTGGTTCAGATGCAGAATCTAAAAGGTCATTTCGATTATTTGGA
AAAAGAAGATCTCTTTATGAAAATTATTCCACTAAGTGCCGAGTTGAGGTACACAGGTTG
TCTACTTACTGGGCAAATGATCCAAGAGTACAAGAAGCTCTTAATGTTCGTAAGGGAGCT
ATAACAAGATGGACAAGATGTAGGGAAAGTATCGTGAATAAAACTTACACTATTACTTTC
CAAGATAGCATACCTTATCATGTGGAACTCAGCAAAAAACTTTATCGATCACTTATATAC
AGTGGCGATCATGATATGGGCATTCCATTCCAATCAACTCAATTTTGGATAAAATCTCTA
AATTATTCTATTGTGGATGAATGGCGGCCATGGAGTTTTGATGGTCAAGTTGCAGGATAT
ACAAGATCCTATTCCAACCAGATGACATTTGCAACTGTCAAGGGAGCAGGACATGTAGCT
CCTGAGTACAAGCCTAAAGAGTGCTTTACCATGTTTCAAAGATGGTTGTCTCATGAACCA
CTTTGA

Peptide Sequence

PEP ID

XP_016466316.1
PEP Infomation

PREDICTED: serine carboxypeptidase-like 13 [Nicotiana tabacum]
Sequence

MANQVRPCSEPGGFATELSAPVGLAAFRKSCLNGENYGSLSAELAGLFFEAVKNRIGYVL
DKLGASLMISMAGFDIAFESDIYHIPIQLIMLDIRSNPNFDLEIGVTVTLISTQIWMCRL
RSIASDARSSIGLGFTYTHTHTHIYIYXIISLVSIINFFLLFYRVVVLPQHAAASHSTVE
FLPGFEGPLPFHLETGYIGVGEYEEVQLFYYFLKSESEPTKDPILIWLSGGPGCSSFTAL
VYQIGPLYFEPNEYNGSLPKLTLNPNSWTKVANIIFLDQPVNSGFSYATTSTTFKSTDLQ
ACHHIYQFLRKWLIKHQEFIRNPMYIGGDSYSGITVPVITQLISNGIEAGHKPSINLKGY
ILGNPSTFPLQYNYWVPYAHGMGLISDELYQLISGINKPHILEPSCGSDAESKRSFRLFG
KRRSLYENYSTKCRVEVHRLSTYWANDPRVQEALNVRKGAITRWTRCRESIVNKTYTITF
QDSIPYHVELSKKLYRSLIYSGDHDMGIPFQSTQFWIKSLNYSIVDEWRPWSFDGQVAGY
TRSYSNQMTFATVKGAGHVAPEYKPKECFTMFQRWLSHEPL

Transcript Sequence

Gene sequence data has not been registered.